Question: Empty Bowtie2 Output
gravatar for Mikel Egaña Aranguren
5.1 years ago by
Mikel Egaña Aranguren10 wrote:
Hi; I'm trying to use the bowtie2 wrapper but it generates and empty output with the "no peek" sign. I have sucesfully recreated the analysis with the same datatsets on the shell, so it must be something to do with Galaxy, but I don't know where to look at. Any clues? Thanks I'm using bowtie2-2.1.0 and Galaxy: changeset: 10421:a477486bf18e branch: stable tag: tip user: Nate Coraor <> date: Thu Sep 26 11:02:58 2013 -0400 summary: Bugfix for tool-to-destination mapping, tool ids are lowercased but the mapping id was not lowercased -- Mikel Egańa Aranguren, Ph.D.
alignment bowtie • 966 views
ADD COMMENTlink modified 5.1 years ago by Jennifer Hillman Jackson25k • written 5.1 years ago by Mikel Egaña Aranguren10
gravatar for Jennifer Hillman Jackson
5.1 years ago by
United States
Jennifer Hillman Jackson25k wrote:
Hello Mikel, This is a known issue with Bowtie2 at this time and a correction is in progress. Sorry for any confusion, Jen Galaxy team -- Jennifer Hillman-Jackson
ADD COMMENTlink written 5.1 years ago by Jennifer Hillman Jackson25k
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