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Question: Bam To Fastq Conversion
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gravatar for William M. Strauss
6.5 years ago by
William M. Strauss • 10
William M. Strauss • 10 wrote:
I have a bunch of BAM files that I need to convert to FASTQ, are there such tools in Galaxy?
galaxy • 5.5k views
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modified 6.5 years ago by fubar ♦ 1.1k • written 6.5 years ago by William M. Strauss • 10
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6.5 years ago by
fubar ♦ 1.1k
Australia
fubar ♦ 1.1k wrote:
There's a picard sam to fastq converter which AFAIK works on bams too: https://main.g2.bx.psu.edu/tool_runner?tool_id=picard_SamToFastq On Sat, May 26, 2012 at 9:48 AM, William M. Strauss -- Ross Lazarus MBBS MPH; Associate Professor, Harvard Medical School; Head, Medical Bioinformatics, BakerIDI; Tel: +61 385321444;
ADD COMMENT • link written 6.5 years ago by fubar ♦ 1.1k
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