Question: How To View The Tophat Output ?
6.7 years ago by
Xu, Jianpeng • 30
Xu, Jianpeng • 30 wrote:
Hi , I have installed our local galaxy and tried to run some programs. I have run the Tophat with RNA-seq data. There are two output files: accepted_hits, and splice_junctions. Can you tell me how to view the results files? Is there a tool on galaxy that can be used to view the result ? Can I use IGV to view it ? Thanks a lot. Jianpeng ________________________________ This e-mail message (including any attachments) is for the sole use of the intended recipient(s) and may contain confidential and privileged information. If the reader of this message is not the intended recipient, you are hereby notified that any dissemination, distribution or copying of this message (including any attachments) is strictly prohibited. If you have received this message in error, please contact the sender by reply e-mail message and destroy all copies of the original message (including attachments).
ADD COMMENT • link •modified 6.7 years ago by Jennifer Hillman Jackson ♦ 25k • written 6.7 years ago by Xu, Jianpeng • 30