Question: Drosophila Yakuba Reference Genome
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gravatar for Evgeny Brud
6.7 years ago by
Evgeny Brud10
Evgeny Brud10 wrote:
Hi, Could galaxy include the Drosophila yakuba reference genome for use with Tophat? It's not listed.
galaxy • 819 views
ADD COMMENTlink modified 6.7 years ago by Jennifer Hillman Jackson25k • written 6.7 years ago by Evgeny Brud10
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gravatar for Jennifer Hillman Jackson
6.7 years ago by
United States
Jennifer Hillman Jackson25k wrote:
Hello, The quickest way to use a genome that is not already indexed is to load it into you history and select it as a custom genome from the TopHat tool form with the option: "Will you select a reference genome from your history or use a built- in index?:" -> "Use one from the history" Instructions are included in this wiki: http://wiki.g2.bx.psu.edu/Learn/CustomGenomes This genome is sourced from UCSC and is available here: http://hgdownload.cse.ucsc.edu/downloads.html Best, Jen Galaxy team
ADD COMMENTlink written 6.7 years ago by Jennifer Hillman Jackson25k
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