Question: Question About Building A Reference Genome Index Using Bowtie
gravatar for William Light
6.5 years ago by
William Light50 wrote:
I am trying to compare two genetically different strains that I have sequenced using SOLiD. I was trying to ask where these two strains are different, either in terms of deletions or polymorphisms, and one idea I had was to use Bowtie to create an index from one of these strains and then to map my reads for the other strain using this index. Is this a reasonable strategy? - Will Light Northwestern University
alignment bowtie • 780 views
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