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Question: Adding New Tools In Galaxy
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gravatar for Makis Ladoukakis
7.2 years ago by
Makis Ladoukakis • 30
Makis Ladoukakis • 30 wrote:
Dear Galaxy developers, Currently I am adding new tools to my galaxy instance as scripts written in Perl language. I was wandering if there is a way to add tools either as .bin or .exe format or if only scripts are supported. I couldn't find anything about it in the wiki or in the FAQ. Thank you, Makis Ladoukakis
galaxy • 748 views
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modified 7.2 years ago by Dannon Baker ♦ 3.7k • written 7.2 years ago by Makis Ladoukakis • 30
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gravatar for Dannon Baker
7.2 years ago by
Dannon Baker ♦ 3.7k
United States
Dannon Baker ♦ 3.7k wrote:
Makais, Any type of command line tool, whether script or a binary executable, can be used by Galaxy as long as it's properly installed on the system and accessible to the Galaxy user. See http://wiki.g2.bx.psu.edu/Admin/Tools/Tool%20Config%20Syntax#A.3Cc ommand.3E_tag_set for more details on how you might call a compiled executable. Thanks for using Galaxy, -Dannon
ADD COMMENT • link written 7.2 years ago by Dannon Baker ♦ 3.7k
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gravatar for Dannon Baker
7.2 years ago by
Dannon Baker ♦ 3.7k
United States
Dannon Baker ♦ 3.7k wrote:
Makais, Any type of command line tool, whether script or a binary executable, can be used by Galaxy as long as it's properly installed on the system and accessible to the Galaxy user. See http://wiki.g2.bx.psu.edu/Admin/Tools/Tool%20Config%20Syntax#A.3Cc ommand.3E_tag_set for more details on how you might call a compiled executable. Thanks for using Galaxy, -Dannon
ADD COMMENT • link written 7.2 years ago by Dannon Baker ♦ 3.7k
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