Question: RNA-seq : problem with gene ID
gravatar for apcherchloe
5 weeks ago by
apcherchloe0 wrote:

Hi all, It's the first time for me on galaxy and I have some problem.

After the Deseq2 analyses, I have an excel tab with many genes. I try to choose some gene that have a big fold change with a good p-value.

But then I can't identify my gene. I have this kind of gene ID :


How convert this gene ID to identify them on gene ontology?

Thanks, Chloé !

gene convert name deseq2 rna-seq • 67 views
ADD COMMENTlink modified 5 weeks ago by Jennifer Hillman Jackson25k • written 5 weeks ago by apcherchloe0
gravatar for Jennifer Hillman Jackson
5 weeks ago by
United States
Jennifer Hillman Jackson25k wrote:


These are Entrez gene identifiers.

To capture the associated GO assignments, use the tool: annotateMyIDs annotate a generic set of identifiers (Galaxy Version

To convert to other gene identifier formats, use the tool: UniProt ID mapping and retrieval

Thanks! Jen, Galaxy team

ADD COMMENTlink written 5 weeks ago by Jennifer Hillman Jackson25k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 109 users visited in the last hour