Question: Transfer FASTQ data from external resource to Galaxy
0
gravatar for g.s.ch
14 days ago by
g.s.ch0
g.s.ch0 wrote:

Dear all Please how can I transfer a FASTQ file directly from Illumina basespace to Galaxy? Thanks Gio :>

upload galaxy • 52 views
ADD COMMENTlink modified 14 days ago • written 14 days ago by g.s.ch0
0
gravatar for Jennifer Hillman Jackson
14 days ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

Choices:

  1. If the data is accessible with a public URL, that can be entered directly into the Galaxy Upload tool. I'm not sure if that site produces such as URL -- you'll need to ask them.
  2. Download the data locally to your own computer/server and then Upload it to Galaxy. Use FTP.
  3. Hybrid of 1 & 2: Transfer the data to a location on your own computer/server/service running a web server with public access, then upload to Galaxy by URL.

FAQ: https://galaxyproject.org/support/

Thanks! Jen, Galaxy team

ADD COMMENTlink modified 14 days ago • written 14 days ago by Jennifer Hillman Jackson25k
0
gravatar for g.s.ch
14 days ago by
g.s.ch0
g.s.ch0 wrote:

Thank you very much Jen I just downloaded the fastq files to my computer and then uploaded to Galaxy. Cheers Gio :>

ADD COMMENTlink written 14 days ago by g.s.ch0
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