Hi! I'm new with bio-info analysis and I'm doing my first ChIP-Seq analysis with Galaxy. I followed the https://galaxyproject.org/tutorials/chip/ to have a step-by-step protocol that I adjust with my samples.
Since the start, I'm using the database: mm10 with no problem, but now that I'm using the "Extract Genomic DNA using coordinates from assembled/unassembled genomes (Galaxy Version 3.0.3)". I need to choose a source for the reference genome, locally cached (like in the example of the tutorial) but I need to enter a "Parameter reference_genome requires a value, but has no legal values defined." ... what am I supposed to enter? Because mm10 doesn't work and I try a lot of combinaison!! What value am I supposed to enter?
Thank you so much in advance for help!!