Question: MultiQC Salmon output
0
gravatar for jevanveen
3 months ago by
jevanveen10
jevanveen10 wrote:

Hello!

Has anyone had success pulling data from Salmon into MultiQC? It doesn't appear as an option in the version of MultiQC on the main Galaxy instance but maybe someone has done this with the "custom input" parameter?

If not, perhaps the version of MultiQC on the main Galaxy instance can be updated? I believe from the MultiQC docs that the newest version of MultiQC can handle Salmon output. Thanks!

Ed

rna-seq salmon multiqc galaxy • 97 views
ADD COMMENTlink modified 3 months ago by Jennifer Hillman Jackson25k • written 3 months ago by jevanveen10
1
gravatar for Jennifer Hillman Jackson
3 months ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

Updating the tool for this function is a good idea.

Other updates are in progress for this tool, please review current issues and create a new enhancement request issue ticket if this is not captured yet. https://github.com/search?q=org%3Agalaxyproject+multiqc&type=Issues

Thanks! Jen, Galaxy team

ADD COMMENTlink written 3 months ago by Jennifer Hillman Jackson25k
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