Question: Ftp And Command Line Access In Galaxy
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gravatar for Robert Curtis Hendrickson
7.4 years ago by
Nate, The Galaxy's ability to pull files with user/password from FTP sites as a client is great. However, I need to pull data from an HTTP site at a sequencing center with user/password (already tried to get them to set up an FTP server, no luck). Any way to do this? If not, would it be easy to add? Regards, Curtis
galaxy • 829 views
ADD COMMENT • link • modified 7.4 years ago by Peter Cock • 1.4k • written 7.4 years ago by Robert Curtis Hendrickson • 130
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gravatar for Peter Cock
7.4 years ago by
Peter Cock • 1.4k
European Union
Peter Cock • 1.4k wrote:
On Wed, Jun 22, 2011 at 6:47 AM, Robert Curtis Hendrickson Try asking the sequencing centre if the username and password can be provided as part of the HTTP URL, then give that URL to Galaxy. Peter
ADD COMMENT • link written 7.4 years ago by Peter Cock • 1.4k
If it's using HTTP Authentication, the URL is the same as with ftp: http://user:host@example.org/file.ext Other authentication systems which use forms and cookies or similar methods won't work. --nate
ADD REPLY • link written 7.4 years ago by Nate Coraor ♦ 3.2k
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