Question: Macs2 running to one sample
0
gravatar for anasofiamoreira94
7 months ago by
anasofiamoreira9410 wrote:

Good morning, Im working with samples from ChIP-seq, and now i'm using macs2, however when i use it, it only does the peaks to one of the three samples that i got. Thanks and have a good day.

ADD COMMENTlink modified 7 months ago by Jennifer Hillman Jackson25k • written 7 months ago by anasofiamoreira9410
0
gravatar for Jennifer Hillman Jackson
7 months ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

Are read groups (@RG) included in your BAM inputs? This will produce a single combined MACS2 output.

Please see: https://biostar.usegalaxy.org/p/16599/#26753

Thanks! Jen, Galaxy team

ADD COMMENTlink written 7 months ago by Jennifer Hillman Jackson25k
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