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• Tests on a tool with an input of type data_collection
  Hello folks, My Tool#1 is using a data_collection type created by Tool#2 as an input parameter. ...
• Problem with new tool definition xml file
  Hello, I've cloned and obtained a local Galaxy instance. I've followed the initial suggested ste...
• Create local toolshed using Planemo
  Hello, I tried to create galaxy local toolshed using planemo. I used command as follows, 1. cre...
• toolshed repository - "This revision can be installed: False" - why?
  I built a tool that passed `planemo test` and `planemo shed_lint`, and I deployed it to a testtoo...
• tool integration with planemo
  Hi, I have been through planemo documentations, read the galaxy-iuc-standards but I still need h...
• How can I set a directory as planemo tool_init --example_input?
  Hi all, I'm trying to publish a script that takes a directory which includes dozens of SNP VCFs a...
• Correctly installing to toolshed
  Hi, I'm new to publishing tools/repository on the toolshed.  I have used planemo and lint and tes...
• planemo t: JobOutputsError occurs, but example_output and script outputs are the same
  Hello, `planemo t` is giving me `JobOutputsError: History item different than expected, differen...
• Galaxy SGE Cluster, Planemo testing?
  Hi, Is it possible to use "planemo test" functionality on an SGE cluster? I can correctly run a ...
• planemo shed_create lead to bioblend error 404
  Hi, I am running a dev galaxy18.01 on cluster HPC with a local toolshed. I am stopped at shed c...
• planemo test --install_galaxy error
  Hi, I am trying to wrapping a tool for Galaxy. I made a simple xml file with planemo and plan...
• planemo test failure (virtualenv problem?)
  When I try to run planemo (v0.21.1) I get an error that seems to involve virtualenv. I followed t...
• Custom tool error: Weird input given to a parameter that requires a fastqc file -- Solution: debug with Planemo
  Greetings, I added a script to my local galaxy and I got the following error: with open...
• "Tool error: Unable to finish job" on the DOCKER version of galaxy, but not for the usual reasons (missing dependencies) nor is it consistent
  I created a wrapper for the NEAT-genReads NGS simulation tool but I am running into the dreaded "...