Question: RNA star fails on collection
0
gravatar for Taamslab
3 months ago by
Taamslab0
Taamslab0 wrote:

Using RNA-Star on collection now results in the job "succeeding" but all alignments are empty and all the log files contain

"/galaxy-repl/main/jobdir/018/288/18288007/tool_script.sh: line 9: STAR: command not found"

Please advise

rna-seq alignment rna star • 127 views
ADD COMMENTlink modified 3 months ago by Jennifer Hillman Jackson25k • written 3 months ago by Taamslab0
0
gravatar for Jennifer Hillman Jackson
3 months ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

The public Main Galaxy server at https://usegalaxy.org is presenting with job errors across many tools at this time. We are actively working to correct the issues.

Please follow this ticket for updates: https://biostar.usegalaxy.org/p/26580/

Once the server is corrected, retest your specific issue and comment here in your original post if the problems persist and we can troubleshoot the use case.

Thanks! Jen, Galaxy team

ADD COMMENTlink written 3 months ago by Jennifer Hillman Jackson25k
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