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• How to import a published workflow from a Galaxy server to my server?
  Hello, I would like to try to use published workflow. I found a list [here][1]. I can either "i...
• For Constructing Workflow Of Workflows
  Hi, This is Deblina. I am working as a PhD student in Martin Luther University Wittenberg,...
• Using filename as a tool variable
  I know you can use #{input} in the workflow editor to change the name of the output files, howeve...
• Upload of fastq files in the workflow
  Dear All, I successfully upload couple of files (fastq) using cyberduck in the server usegalaxy.o...
• loops in Galaxy workflow?
  Is it possible to use loops (or cycles) in Galaxy workflow? I have a file with multiple fasta seq...
• Workflow Questions
  I have two questions about constructing a workflow, or possible requests for changes. 1) Is it ...
• File Extensions
  One issue I have stumbled upon is that the tmp files fed into the program do not preserve the fil...
• Using Output As Parameter In Workflow
  I have a user who is trying to use the output of summary statistics as input to the next step in ...
• Variant mapping workflow and tutorial in Galaxy
  Hi, I have a zebrafish mutant that I am trying to map. So I did the mapping crosses and sequenced...
• Workflow reference genome
  Dear GALAXY team, In a workflow, is it possible to change the database type of an output file fr...
• Batch workflow with two different inputs each time?
  Dear Galaxy Community, I have actually installed Galaxy on our cluster, and I am now trying to d...
• Need help with "Barcode Splitter" tool
  Hi, I would like to use the new "enhanced" barcode splitter that was developed this past year. I...
• How to run a workflow using Dataset Collection?
  HI, I created a workflow which has as input a dataset collection which consists of 12 BAM Files....
• Setting Dbkey In A Workflow
  I'm working on making my first workflow in Galaxy, using a local server. A high level overview of...
• Fwd: Workflows With Conditional Statements
  I filed an enhancement report since if the workflow conditional facility does not appear to exist...
• Problem in downloading Workflows
  Hi All, I had a problem trying to download a workflow. Instead of starting the downloading of th...
• Is it possible to add a script to a workflow?
  So I am new to Galaxy but I was wondering, is it at all possible to make a previously made script...
• Is it possible for workflow parameters to take information from the names of input datasets? e.g. ${Read_group } is set to be the first three characters of input dataset name.
  HI. I would like to run a workflow in parallel on list of  multiple data sets (using the dataset ...
• Stalled job/workflows at https://usegalaxy.org 9/24/2018 -- RESOLVED
  Dear Sir/Madam, I am a registered user of the public Galaxy Server (main). All jobs I submitted...
• Using bioblend to run a workflow with ${workflow_parameters}
  I have a workflow with output files that are renamed using workflow_parameters specified by putti...
• Renaming Dataset In Workflow
  Is it possible when renaming a dataset in a workflow to have it fill in the dataset number like t...
• Workflow Improvement Requests (Long)
  Dear all, Recently, users (of our local galaxy server) started using workflows, and are very ple...