Question: MapAlignerPoseClustering on Galaxy
1
gravatar for Karolína Trachtová
8 months ago by
Czech Republic/Brno/Masaryk University
Karolína Trachtová10 wrote:

Hello,

I would like to use function MapAlignerPoseClustering from OpenMS in my Galaxy workflow for mass spectrometry data. However, this is one of a few functions of OpenMS package that are not yet in the Galaxy. On the page https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms, I found the statement about MapAlignerPoseClustering saying "These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in by the automatic conversion step". Is there really no way of getting this function into Galaxy? I was able to write wrappers for some of my tools, but I have no luck with MapAlignerPoseClustering as it should take a dynamic number of inputs and give the same number of output files.

Thanks, Karolina

ADD COMMENTlink modified 8 months ago by Bjoern Gruening5.1k • written 8 months ago by Karolína Trachtová10
1
gravatar for Bjoern Gruening
8 months ago by
Bjoern Gruening5.1k
Germany
Bjoern Gruening5.1k wrote:

Hi Karolina,

I added this tool to the OpenMS suite.

Happy research! Bjoern

ADD COMMENTlink written 8 months ago by Bjoern Gruening5.1k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 128 users visited in the last hour