Question: BWA error, dataset conversion, history download questions
0
gravatar for samira.kalayinia
6 months ago by
samira.kalayinia0 wrote:

hello I want to use BWA for alignment of my reads, but when I fill all empty spaces, I give one error about dataset part! this part is inactive and I cant choose one option for that, what should I do? please guide me

ADD COMMENTlink written 6 months ago by samira.kalayinia0
1

Please post the actual error message.

ADD REPLYlink written 6 months ago by Devon Ryan1.9k

thank you so much, I found the solution. can you help me how I can save the history in my system? for example I want to save BAM or SAM.

ADD REPLYlink modified 6 months ago • written 6 months ago by samira.kalayinia0
0
gravatar for Jennifer Hillman Jackson
6 months ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

Histories are automatically saved to your account. Histories can also be downloaded/saved (as a whole).

Individual datasets can also be downloaded. If you want to convert SAM<>BAM (either way), use the tools in the group NGS: SAMtools.

How-to:

Thanks! Jen, Galaxy team

ADD COMMENTlink written 6 months ago by Jennifer Hillman Jackson25k
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