Question: Galaxy is taking forever to run my submissions
gravatar for annet.kyomuhangi
4 days ago by
annet.kyomuhangi0 wrote:

I am analyzing RNA seq data and HISAT2 is taking forever to run. Someone explain why. Thanks


galaxy • 30 views
ADD COMMENTlink modified 4 days ago by Jennifer Hillman Jackson23k • written 4 days ago by annet.kyomuhangi0
gravatar for Jennifer Hillman Jackson
4 days ago by
United States
Jennifer Hillman Jackson23k wrote:


If working at Galaxy Main (, the servers have been very busy for the last few weeks. Queue time have been exceeding 24 hrs in some cases. Allow queued jobs to stay queued and avoid deleting/restarting.

Full details about what can impact queue time and how to manage jobs: > Datasets and how jobs execute

I'll double check with our admin that a new problem did not just come up and will write back if something is discovered.

Thanks for reporting the problem and hope this helps! Jen, Galaxy team

ADD COMMENTlink written 4 days ago by Jennifer Hillman Jackson23k
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