Question: Interval file to another type of file
0
gravatar for simomll
6 months ago by
simomll0
simomll0 wrote:

How can I convert a file.interval, obtained from analysis of a file.bed with a workflow in galaxy, to a type of file which it is readable by my mac computer? for example txt format or an another type..

Thank you for the attention

chip-seq • 267 views
ADD COMMENTlink modified 6 months ago by Jennifer Hillman Jackson25k • written 6 months ago by simomll0
2
gravatar for Jennifer Hillman Jackson
6 months ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

Change the extension on the downloaded file to .txt or use the option to "choose" the application to use when double-clicking to open the file (example: TextEdit). You can set up your preferences to always open files with the given plain text extension (tabular, bed, sam, gtf/gff, etc) with TextEdit by saving the file once open within that application. Be aware that very large data may not fully open or exceed memory - it depends on your computer's resources.

If you want to access it line-command (vi, emacs, or input to a line-command tool), the extension usually does not matter. All plain text files are treated the same, only binary/compressed files would be unreadable (uncompress as needed).

Hope that helps! Jen, Galaxy team

ADD COMMENTlink modified 6 months ago • written 6 months ago by Jennifer Hillman Jackson25k

Hello Jennifer. I changed the extension to .txt; it was very simple!

Thank you very much for your detailed explanation

ADD REPLYlink written 6 months ago by simomll0
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 124 users visited in the last hour