Question: Galaxy-using trimmomatics with ChIP seq pair ended (only one file with both reads)
gravatar for jramo033
11 months ago by
jramo0330 wrote:

I am trying to run Trimmomatics in Galaxy under "pair end (as collection)" for afastqsanger.gz file with both reads and I got the message "no fastqsanger.gz dataset collection available". What should I do? split the file into two different files? if so, how can I do it? Is there any other way?

chip-seq • 305 views
ADD COMMENTlink modified 11 months ago by Jennifer Hillman Jackson25k • written 11 months ago by jramo0330
gravatar for Jennifer Hillman Jackson
11 months ago by
United States
Jennifer Hillman Jackson25k wrote:


Check the metadata for your input dataset collection - it should be assigned the fastqsanger.gz datatype.


Thanks, Jen, Galaxy team

ADD COMMENTlink written 11 months ago by Jennifer Hillman Jackson25k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 103 users visited in the last hour