Question: How to do multiple shuffling using Galaxy (ShuffleBed)?
gravatar for annamariabugaj
7 days ago by
annamariabugaj0 wrote:

I would like to perform enrichment analysis and I need to shuffle data 1000 times and then intersect the 1000 outputs with particular genomic features - is there any way I can do it using Galaxy?

bedtools • 52 views
ADD COMMENTlink modified 6 days ago by Jennifer Hillman Jackson22k • written 7 days ago by annamariabugaj0
gravatar for Jennifer Hillman Jackson
6 days ago by
United States
Jennifer Hillman Jackson22k wrote:


Try using a dataset collection. You can group the genomes into a collection then run through multiple tools in batch, within a workflow or outside of one.

This is how to use collections:

Thanks, Jen, Galaxy team

ADD COMMENTlink written 6 days ago by Jennifer Hillman Jackson22k
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