Question: IOError: [Errno 2] No such file or directory: '/galaxy-repl/main/scratch2/tmppqOf7j'
0
gravatar for annamariabugaj
9 days ago by
annamariabugaj0 wrote:

I am trying to do statistics and get this error:

Traceback (most recent call last): File "/galaxy-repl/main/jobdir/016/527/16527280/set_metadata__PUIn7.py", line 1, in <module> from galaxy_ext.metadata.set_metadata import set_metadata; set_metadata() File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy_ext/metadata/set_metadata.py", line 85, in set_metadata datatypes_registry.load_datatypes( root_dir=galaxy_root, config=datatypes_config ) File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/datatypes/registry.py", line 104, in load_datatypes tree = galaxy.util.parse_xml( config ) File "/cvmfs/main.galaxyproject.org/galaxy/lib/galaxy/util/__init__.py", line 214, in parse_xml root = tree.parse( fname, parser=ElementTree.XMLParser( target=DoctypeSafeCallbackTarget() ) ) File "/cvmfs/main.galaxyproject.org/python/lib/python2.7/xml/etree/ElementTree.py", line 647, in parse source = open(source, "rb") IOError: [Errno 2] No such file or directory: '/galaxy-repl/main/scratch2/tmppqOf7j'

software error • 68 views
ADD COMMENTlink modified 8 days ago by Jennifer Hillman Jackson22k • written 9 days ago by annamariabugaj0
0
gravatar for Jennifer Hillman Jackson
8 days ago by
United States
Jennifer Hillman Jackson22k wrote:

Hello,

This error was due to brief cluster problem that has been corrected. Please rerun any jobs that failed during this time.

Thanks for reporting the problem! Jen, Galaxy team

ADD COMMENTlink written 8 days ago by Jennifer Hillman Jackson22k
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