Hi, I tried many times to combine 32 .vcf files in Galaxy using VCF Combine. In the output file I can see only a few lines (chromosome 1). I downladed the file and the downloaded file also contain only few lines in it. Using the edit attributes tool I edited the Number of comment lines to larger numbers, and also did unclick, so that it does not have any limit. But, everytime it showed up the same result. If you could help me with this it will be highly appreciated.
Thank you, Sri