Question: HISAT2: "Skip reference strand of reference" instead of "Skip REVERSE strand of reference"
0
gravatar for aciole.d
5 months ago by
aciole.d0
aciole.d0 wrote:

Hello everyone.

This is my first post and I'm only doing it because I didn't find anything about it. It is only a little mistake in the name a HISAT2's parameter.

In the parameters of alignment there is "Skip forward strand of reference". There is also "Skip reference strand of reference", when I guess it should be "Skip reverse strand of reference". I would like to notify this to the development team and I think that Biostars is a suitable place to do so. I don't think it is an important subject enough to contact the dev team. I apologize if I did wrong. As I've said before, it is not a big deal. Thanks.

David Aciole Barbosa Núcleo Integrado de Biotecnologia Universidade de Mogi das Cruzes São Paulo, Brazil

parameter galaxy name hisat2 • 226 views
ADD COMMENTlink modified 5 months ago by Jennifer Hillman Jackson23k • written 5 months ago by aciole.d0
1
gravatar for Devon Ryan
5 months ago by
Devon Ryan1.8k
Germany
Devon Ryan1.8k wrote:

Nicola thankfully fixed this a while back, so the server admins just need to find some time to update the server :)

ADD COMMENTlink written 5 months ago by Devon Ryan1.8k

Thank you for the answer.

ADD REPLYlink written 5 months ago by aciole.d0
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