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• Reference genome for RNA STAR
  Hi, I am trying to use STAR for aligning RNASeq data but it doesn't have any reference genome. I...
• Where to download Human (Homo sapiens) (b38): hg38 reference genome file available for your RNA STAR?
  I would like to download that same exact reference genome file that is available for everyone to ...
• RNA-star: splice junction
  Hello, I am new to RNA-seq data. I am using the built-in index and using the reference genome wi...
• How to add my reference genome to use RNA STAR in usegalaxy.org
  "If your genome of interest is not listed, contact the Galaxy team (--genomeDir)" It is my first ...
• ERROR WHEN RUNNING AN RNA STYAR ANALYSIS
  Hello all. I´ve tried to run an analysis with RNA STAR but I´ve immediatly got the following err...
• RNA-STAR Two Pass mode
  Hello, I would like to call variants in RNA-seq transcriptome. Is it possible to run RNA-STAR i...
• Add reference genome index to RNA STAR tool
  Hello, I would like to request that the rhesus macaque (RheMac8) genome reference index be added ...
• RNA STAR is taking hours to start to run
  I am trying to use RNA STAR but I have been waiting for hours and it is still queued, no sign of ...
• RNA STAR is taking hours to start to run
  I am trying to use RNA STAR but I have been waiting for hours and it is still queued, no sign of ...
• STAR --> option for reference genome
  Hi, I have been trying to test RNA-Star on the Galaxy main server, but in the option for 'Select...
• Memory allocation error while trying to align paired end reads using RNA STAR
  Hi This is my first time using Galaxy for RNA Seq analysis. After uploading and normalizing my r...
• Checking coverage of yeast whole genome sequencing data
  I have WGS data (2x150b paired end NextSeq reads) for Yeast (sacCer3) and would like to know how ...
• Get multimapped reads from STAR in Galaxy.
  Hi, Using RNA STAR in Galaxy to map my yeast read back to the genome: (single end reads), I'm g...
• Can I make a 'gene model for splice junctions' for use in RNA STAR inside Galaxy?
  I am a complete newbie to RNA-seq analysis. I am trying to follow online tutorials etc to learn t...
• RNA STAR "empty"
  Hi there, I wanted to run RNA STAR to align my RNAseq data. The genome I am working on is not in...
• Adding Star-fusion V.1.2.0 to Galaxy
  Would it be possible to add STAR-fusion version 1.2.0 to the galaxy server I have been looking a...
• RNA STAR -Gapped-read mapper for RNA-seq data (Galaxy Version 2.5.2b-0)
  Hi, Now that Galaxy has introduced RNA Star in their list of tools in NGS: RNA Analysis, I wante...
• RNA STAR error
  Hi, I was just trying out RNA STAR for the first time using deafult settings and a reference geno...
• RNA-STAR Failing using hg38 but works for hg19
  Hi, I am trying to align two collections of 4 single-end RNA-Seq fastq files (8 fastq files tota...
• RNAseq: RNA STAR ---Mapping to a viral genome
  Hi, I am analyzing an infection time course in a human cell line transduced with Vaccinia virus. ...
• RNA STAR job error
  Hello, I am trying to RNA STAR aligner on pair end reads with inbuilt index but I am getting err...
• Can I analyze my RNA-seq data with TRINITY and/or STAR workflows in Galaxy?
  HI: Can I analyze my RNA-seq data with TRINITY and/or STAR workflows in Galaxy? Where can I find ...
• RNA-star memory error on galaxy
  I am trying to run RNA-star on galaxy for my zebrafish SE and PE samples. However, it is getting ...