Question: Bowtie2 jobs queued for over 24hours
gravatar for elliottchapman91
9 months ago by
University of Edinburgh
elliottchapman9120 wrote:


Are there currently any known issues with bowtie2? I've had a couple of jobs that were queued for over 24 hours, restarting them again this morning hasn't resolved the issue. It seems to be specific to bowtie2 as I am able to run other tools without any issue.



bowtie2 • 253 views
ADD COMMENTlink written 9 months ago by elliottchapman9120

Hi Elliot, There are two other reports of cluster delays. Our administrator is looking into this right now.

I was not able to find your account at If you would like us to review your exact history/data/jobs to eliminate other sources of delays (and potentially offer solutions), an email from your Galaxy account's registered email address can be sent to Please include a link to this post in the message so we can associate the two.

Thanks! Jen, Galaxy team

ADD REPLYlink modified 9 months ago • written 9 months ago by Jennifer Hillman Jackson24k
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