Question: DEXseq error - "Error in library("DEXSeq") : there is no package called 'DEXSeq'"
0
gravatar for johanvn
6 months ago by
johanvn10
johanvn10 wrote:

Dear all I want to analyse my RNA-seq data using DEXseq on the galaxy platform. I have made count tables of all my BAM files (output from Tophat - accepted hits) and the gtf file using DEXseq-count. When i try to run dexseq it doesn't even begin to run, it just reports the following error:

Fatal error: An undefined error occured, please check your input carefully and contact your administrator. Error in library("DEXSeq") : there is no package called 'DEXSeq'

Any suggestions on how to proceed are much appreciated!

dexseq rna-seq • 214 views
ADD COMMENTlink modified 6 months ago by Jennifer Hillman Jackson23k • written 6 months ago by johanvn10
0
gravatar for Jennifer Hillman Jackson
6 months ago by
United States
Jennifer Hillman Jackson23k wrote:

Hello,

The tool is pending a dependency correction. Please follow progress here: https://github.com/galaxyproject/galaxy/issues/3709

Thanks for reporting the problem! Jen, Galaxy team

ADD COMMENTlink written 6 months ago by Jennifer Hillman Jackson23k
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