Question: Trinity Assembly - data files too big
0
gravatar for clogan
16 months ago by
clogan0
clogan0 wrote:

I'd like to run a Trinity de novo assembly in Galaxy. My left and right concatenated files are ~27GB each and I have uploaded them via ftp. However when I load them into my workspace they are automatically being unzipped to two 127GB files. This freezes my Galaxy account because it is above the disk space quota. Is there a way to prevent Galaxy from automatically unzipping my files or another work around? Thank you!

trinty • 444 views
ADD COMMENTlink modified 16 months ago by Mo Heydarian800 • written 16 months ago by clogan0
1
gravatar for Mo Heydarian
16 months ago by
Mo Heydarian800
United States
Mo Heydarian800 wrote:

Hello, First, please try clearing out datasets from histories you no longer require. If this is not possible, please email galaxy-bugs@bx.psu.edu with a short request to have your quota increased.

If you may be working with more large datasets, you could consider using Galaxy with Cloudman on a cloud provider such as Amazon Web Services. These instances are scalable up to 16 TB and can persist for as little or as long as you like.

Thanks for using Galaxy!

Cheers, Mo Heydarian

ADD COMMENTlink written 16 months ago by Mo Heydarian800
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 86 users visited in the last hour