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• FastQC doesn't work after Splitter
  Hello, I am working with paired-end reads, in separate files, and as far as I understood these s...
• Splitting Biased Paired End FASTQ data
  The FASTQ splitter in Galaxy warns that the tool only works if Paired-end data has equal length r...
• Barcode Splitter On Paired End Reads
  Dear Galaxy team,   I am sorry for repeatedly asking this question but I would like some feed bac...
• Fastq Splitter Empty And Fastq Manipulator Doesn'T Work
  I am having the same issue as this user: http://user.list.galaxyproject.org/FASTQ-splitter-produ...
• fastq splitter problem
  fastq splitter is not working on paired end read for some of my file and produce output file with...
• Assembly tools will not run
  I am trying to run the Unicycler assembler on a fastq paired-end dataset (groomed and joined or u...
• Joining overlapping paired end reads
  Dear All,   I have DNA sequencing data (targeted sequencing) produced by MiSeq. The size of the...
• Barcode Splitter On Paired End Illumina Reads
  Dear Galaxy team   I am so sorry for repeatedly posting the same question, but I do need some inp...
• Fastq Joiner Fails To Join Pe Data.
  Hi, I have HiSeq2000 paired end sequence data in two separate FASTQ files. I need to filter t...
• Jobs waiting to run
  I've waited for a .txt file to upload for ~ 18 hours. I've now set up an account and tried re-upl...
• Making paired-end reads the same length
  I have paired-end data (in two separate files).  I have groomed my files, and would like to filte...
• How To Split Paired-End Dataset Of Fastq Format
  I downloaded RNA-seq dataset at FASTQ format from SRA of NCBI. I uploaded the dataset onto Galaxy...
• Rna-Seq Galaxy Workflow For Pe Barcoded Samples?
  Hello, I posted to the seqanswers forum, but have not received any feedback. I am working with R...
• splitter not working
  hi everybody. i am very inexperienced in this area, so if you guys can kindly help me to solve my...
• Can I Convert Paired-End Datasets Into Single End Ones?
  Dear All, I have some paired-end datasets to be analyzed, but I am not sure about their Mean Inn...
• splitting paired end fastq reads on galaxy
  Hi, I'm new to galaxy. While working on a paired end data set, I noticed that there is only one f...
• Tophat not executing
  Tophat doesn't seem to be executing on usegalaxy.org. The jobs are being queued, but they haven't...
• problem encoutered in FASTQ splitter !!
  my illumina transcript is not getting splitted by FASTQ splitter?? it has been running for about ...
• fastq joiner and tophat
  Hi,   I have paired end reads of two samples and i used FASTQ joiner to join them, now i want t...