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• "History could not be imported. Please contact a Galaxy administrator" error
  I am having my students use the RNAseq tutorial data from jeremy's post here: https://usegalaxy....
• Assembly with velvet
  I used galaxy two months ago and it used to have a NGS assembly directory. What happened? Can I s...
• Transcriptome assembly with Trinity-Jaccard_Clip
  Dear all May I implement a transcriptome assembly using the parameter --jaccard_clip in the wr...
• Not receiving confirmation for verification to .edu email addresses
  Hello, So I attempted to sign up using my school email address and I'm not receiving the verific...
• problem in transcriptome assembly
  I successfully assembled my raw reads to generate assembly. But when I concatenate the reads, the...
• How to assemble scaffolds using Galaxy
  I haved downloaded scaffold sequences from the Internet. Can I use Galaxy to assemble the scaffo...
• Homer for Motif search
  Hi,    I would like to use HOMER to search for enriched motif on a ChIPseq analysis I did using ...
• ftp not working
  I am trying to upload my data using ftp but everytime i get a pop up window that asks for sign in...
• de novo assembly
  Hi folks I would like to use de novo assembly and quantification for mink RNA-Seq data. I am won...
• Which file must be used for assembly?
  I want to assemble a genome using de novo assembly and I am very new to it. The Illumina sequenci...
• RNA STAR is taking hours to start to run
  I am trying to use RNA STAR but I have been waiting for hours and it is still queued, no sign of ...
• De novo assembly of a genome sequence
  I am new to the Galaxy. Can you do a de novo sequence asembly using the Galaxy? Thanks.
• Assembly waiting to run
  I am trying to do a hybrid assembly using unicycler in Galaxy, but my job has had the status "wai...
• De-novo assembly of a bacterial genome
  I am trying to assemble a bacterial genome of length 8Mb in **orione.crs4.it** . I could successf...
• Galaxy API: Tool build data missing html for input fields
  Hello, I noticed the following when using the api for getting tool info /api/tool/{tool-id}/bu...
• Velvet in usegalaxy.org
  How can i use velvet assembler in usegalaxy.org for de novo whole genome assembly. ?
• RNA STAR is taking hours to start to run
  I am trying to use RNA STAR but I have been waiting for hours and it is still queued, no sign of ...
• can I ftp immediately after sign up
  Hi, i just signed up and want to ftp some files to the server. i am trying to connect to ftp://u...
• blastx evalue problem
  Hello, I am using galaxy blastx and giving cut off e-value of 1.0e-5, but still e-valu...
• Trinity assembly multiple files
  Dear Galaxy team, I am trying to assemble 12 paired reads at the same time using Trinity on Gala...
• Data history problem
  Hi, my data history disappeared when I signed in after logging out for browser software update. I...