Question: Creating galaxy pages with Immport Data
gravatar for Sara Mohammadi
20 months ago by
United States
Sara Mohammadi50 wrote:

I want to create a page through the galaxy and import some gene expression and other data which I got from Immport. Data are in SQL format and I used RImmPort analysis package in R to analysis the data. I need to know how can I start to build my own local galaxy pages and upload the Immport data into it and develop the visualization in that?

galaxy • 477 views
ADD COMMENTlink modified 20 months ago by Jennifer Hillman Jackson24k • written 20 months ago by Sara Mohammadi50
gravatar for Jennifer Hillman Jackson
20 months ago by
United States
Jennifer Hillman Jackson24k wrote:


Pages incorporate other Galaxy objects (Datasets, Histories, Workflows, and Visualizations). Start by loading the data in a format accepted by Galaxy. Tabular might be a good choice, but BED, Interval, GTF, and others are options with the native visualization tool Trackster.

Pages do not have a step-by-step tutorial (but possibly should!). However, there are just a few functions and linking in other existing Galaxy objects is one of them. View the list of current published Pages at for examples of how others format these. Galaxy Objects are defined here.

If you get stuck using a specific Page function, write back with the details and we can help more.

Take care, Jen, Galaxy team

ADD COMMENTlink written 20 months ago by Jennifer Hillman Jackson24k
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