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Question: Error when importing data from Shared Data
1
gravatar for kcummins
2.6 years ago by
kcummins • 10
kcummins • 10 wrote:

I'm following along with the Coursera course on Galaxy, and in the Sequence Data Quality Control video, it asks me to import "BT20 paired-end RNA-seq subsampled (end 1)" from Illumina iDEA Datasets within the Shared Data folder. However, when I try to import the dataset into my history, I get an error message that says "Malformed id (undefined) specified, unable to decode." I've tried with a couple of other files within Shared Data, and they all display the message too. Is there something that I'm doing wrong, or could there be something wrong with the datasets?

Thanks!

galaxy • 585 views
ADD COMMENT • link •
modified 2.6 years ago by Martin Čech ♦♦ 4.9k • written 2.6 years ago by kcummins • 10
3
gravatar for Martin Čech
2.6 years ago by
Martin Čech ♦♦ 4.9k
United States
Martin Čech ♦♦ 4.9k wrote:

You are right, there seems to be a bug when you import from the library dataset detail. Thank you for reporting this, I will fix it.

In the meantime please import your datasets from the folder list instead (https://usegalaxy.org/library/list#folders/F77ce11b6d3c0d73a ) - select the datasets and click the "to history" button. See the screenshot below.

screenshot
ADD COMMENT • link modified 2.6 years ago • written 2.6 years ago by Martin Čech ♦♦ 4.9k

will be fixed once this is merged and Galaxy server updated: https://github.com/galaxyproject/galaxy/pull/2190

ADD REPLY • link written 2.6 years ago by Martin Čech ♦♦ 4.9k
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