Question: built-in genome for HISAT2 not available
0
gravatar for jchou
20 months ago by
jchou0
jchou0 wrote:

I am trying to map fastq to mm9 genome using HISAT2. But the drop-down list of built-in genomes is EMPTY.

genome indexes hisat2 • 687 views
ADD COMMENTlink modified 20 months ago by Jennifer Hillman Jackson23k • written 20 months ago by jchou0
0
gravatar for Jennifer Hillman Jackson
20 months ago by
United States
Jennifer Hillman Jackson23k wrote:

Hello,

Index promotion to Main is pending. Please see this ticket for details and progress, including current alternatives (Custom reference genome and/or using the Test server): https://github.com/galaxyproject/galaxy/issues/1470

Thank you for your patience, Jen, Galaxy team

ADD COMMENTlink written 20 months ago by Jennifer Hillman Jackson23k
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