Question: Convert Formats
gravatar for Liron Levkovitz
12.2 years ago by
Liron Levkovitz10 wrote:
Hello, I'm trying to convert an AXT format file to FASTA . The AXT file include a table with 2,321,097 lines (It's the results of a blastz alignment between hg18 and mm8). Can you give me an estimation of how long it would take? Does it make since that it takes a few days? Thanks in advance, Liron Levkovitz Tel- Aviv University
ADD COMMENTlink modified 12.2 years ago by Anton Nekrutenko1.7k • written 12.2 years ago by Liron Levkovitz10
gravatar for Anton Nekrutenko
12.2 years ago by
Penn State
Anton Nekrutenko1.7k wrote:
Liron: This should be fairly fast. But let us check. Could you please send us the url for the Galaxy history item that contains 2,321,097 lines. You can do this by right-clicking on the eye icon, choosing "Copy link location", and pasting it into your e-mail. Thanks for your feedback. Anton Nekrutenko Assistant Professor Department of Biochemistry and Molecular Biology Center for Comparative Genomics and Bioinformatics 505 Wartik Building PennState University University Park, PA 16802 814 865-4752 814 863-6699 FAX
ADD COMMENTlink written 12.2 years ago by Anton Nekrutenko1.7k
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