Question: Galaxy for GWAS, any tools avaliable
1
gravatar for wanghaohan8903
2.7 years ago by
wanghaohan890310 wrote:

Hi, I was trying to use Galaxy for GWAS, but in the available 3700+ tools, when I search for "GWAS" at here, it only shows two relevant tools, and they are not that relevant.

Is this the actual case that there are not that many GWAS tools supported? or did I do it wrong?

Do Galaxy guys have plans to support GWAS tools soon?

Thanks.

gwas galaxy tools • 1.0k views
ADD COMMENTlink modified 2.7 years ago by Bjoern Gruening5.1k • written 2.7 years ago by wanghaohan890310
4
gravatar for Bjoern Gruening
2.7 years ago by
Bjoern Gruening5.1k
Germany
Bjoern Gruening5.1k wrote:

Hi,

here is a small summary of tools we offer in our Galaxy instance and that are available in the TS.

enter image description here

I would not recommend GATK anymore, but the other, especially freebayes are very good! Cheers, Bjoern

ADD COMMENTlink written 2.7 years ago by Bjoern Gruening5.1k
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