Question: conversion to Bedgraph files
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gravatar for biorashid
2.4 years ago by
biorashid0
biorashid0 wrote:

Hi,

I have BAM files from Bowtie2. I want to use MACS2 bdgdiff in galaxy to identify differntially enriched regions between samples. MACS2 bdgdiff requires bedgraph files. How to convert BAM to bedgraph files that can be used for MACS2 bdgdiff.? Any clues?

Thanks in advance

galaxy • 1.0k views
ADD COMMENTlink written 2.4 years ago by biorashid0
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