Question: 404 error when trying to view history
0
gravatar for matthias.desmet
24 months ago by
Belgium
matthias.desmet140 wrote:

Hi there,


Lately I have been experiencing some issues with the viewing of histories on our local Galaxy instance.

Let me sketch the situation:

  • I have several histories with running jobs, one job generated too much data and I went over my data limit.
  • I deleted and purged some older histories to free up disk space
  • I deleted and purged the offending dataset from my current history

Since the deletion of said dataset, the history it was in is no longer readable. The interface reports the following:

{
  "agent": "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_11_3) AppleWebKit/601.4.4 (KHTML, like Gecko) Version/9.0.3 Safari/601.4.4",
  "url": "https://galaxy/history/view_multipl/api/histories/964b37715ec9bd22/contents?dataset_details=0aab0e4c25198ad8%2C4a56addbcc836c23%2C92b83968e0b52980",
  "options": {
    "data": {
      "dataset_details": "0aab0e4c25198ad8,4a56addbcc836c23,92b83968e0b52980"
    },
    "silent": true,
    "parse": true,
    "emulateHTTP": false,
    "emulateJSON": false
  },
  "xhr": {
    "readyState": 4,
    "responseText": "{\"err_msg\": \"objectstore, _call_method failed: get_filename on , kwargs: {}\", \"err_code\": 404001}",
    "responseJSON": {
      "err_msg": "objectstore, _call_method failed: get_filename on , kwargs: {}",
      "err_code": 404001
    },
    "status": 404,
    "statusText": "Not Found",
    "responseHeaders": {
      "Connection": "keep-alive\r",
      "Transfer-Encoding": "Identity\r",
      "Date": "Mon, 25 Jan 2016 08:21:16 GMT\r",
      "Server": "nginx/1.8.0\r",
      "Content-Type": "application/json\r",
      "Vary": "Accept-Encoding\r",
      "X-Frame-Options": "SAMEORIGIN\r",
      "Cache-Control": "max-age=0,no-cache,no-store\r"
    }
  },
  "source": [],
  "user": {
    "username": "redacted",
    "quota_percent": 1,
    "total_disk_usage": 909093453,
    "nice_total_disk_usage": "867.0 MB",
    "email": "redacted",
    "is_admin": true,
    "tags_used": [
      "exome",
      "hg19"
    ],
    "model_class": "User",
    "id": "f2db41e1fa331b3e"
  }
}

Could this be some kind of bug in the API? I noticed several posts here with similar issues, and I think the cause could be the same.

System info:

  • Galaxy release 15.10, run from .venv with 2 uwsgi workers
  • Ubuntu 14.04.3
     

Thanks!
Matthias

histories ubuntu 15.10 galaxy • 497 views
ADD COMMENTlink written 24 months ago by matthias.desmet140
1

Hi, Matthias

Can you log out, close your browser, and log back in please: it may be the history is trying to get 'dataset_details' for the purged dataset because the browser's sessionStorage has saved it as expanded (shown with details) in the history panel.

ADD REPLYlink written 23 months ago by carlfeberhard390
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