Question: How to create a pseudomolecule?
0
gravatar for vidushipujni
2.5 years ago by
vidushipujni0 wrote:

Hello

I am thankful to the galaxy team for providing a wonderful platform for analyses. I am using this largely for my analyses. In my project I have generated a metatranscriptome assembly using RNA-seq data for the plant genome. Now moving forward in the project. I would like to create a pseudomolecule from consensus sequence between the assembly and reference genome. I am sure a lot of scientists would have done this earlier.

Can anybody please suggest any ideas how to go about doing this in galaxy?

 

Thanks 

Vids

ADD COMMENTlink modified 2.5 years ago by Jennifer Hillman Jackson25k • written 2.5 years ago by vidushipujni0
0
gravatar for Jennifer Hillman Jackson
2.5 years ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

Please see this post: How to download blastn to scaffold from toolshed?

Thanks, Jen, Galaxy team

ADD COMMENTlink written 2.5 years ago by Jennifer Hillman Jackson25k
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