Question: difference bewteen snps142 and snps141
1
gravatar for shja2
2.2 years ago by
shja210
European Union
shja210 wrote:

how get data for snps142 as tabular? what the difference between snps141 and 142?

ADD COMMENTlink modified 2.2 years ago by Jennifer Hillman Jackson24k • written 2.2 years ago by shja210
0
gravatar for Jennifer Hillman Jackson
2.2 years ago by
United States
Jennifer Hillman Jackson24k wrote:

Hello,

The data can be obtained through the UCSC Table browser or their downloads area. Either can be imported into Galaxy. There are other sources, but this will ensure that the data is a match for UCSC reference genomes included at http://usegalaxy.org.

To extract the data for human hg38 from the Table browser directly into your Galaxy history, use the left tool panel's Get Data: UCSC Main function, then set up the form like the graphic below (change the genome build, region, and other options as desired and see the User Guide for full usage directions including the dbSNP project's build information):

Thanks, Jen, Galaxy team

ADD COMMENTlink written 2.2 years ago by Jennifer Hillman Jackson24k
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