Question: How to upload files larger than 50G?
1
gravatar for safa
2.1 years ago by
safa10
United States
safa10 wrote:

I'd like to convert the MultiZ MAF file for chromosome 1 to FASTA format. The UCSC .maf file is about 67G, but the upload limit for Galaxy (via FTP) is 50G. Is there a way I can upload files that are larger than 50G or an alternate way I can do this format conversion? 

fasta upload galaxy maf • 555 views
ADD COMMENTlink modified 2.1 years ago by Jennifer Hillman Jackson23k • written 2.1 years ago by safa10
1
gravatar for Jennifer Hillman Jackson
2.1 years ago by
United States
Jennifer Hillman Jackson23k wrote:

Hello,

The limit is 50 GB. To load larger data, upload in smaller chunks. Even with data from the same chromosome, as long as the dataset can be uncompressed, this can be done, even if just splitting by line numbers. Once in Galaxy, the datasets can be put back together with the tool Concatenate.

Thanks, Jen, Galaxy team

ADD COMMENTlink modified 2.1 years ago • written 2.1 years ago by Jennifer Hillman Jackson23k
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