Question: gff read error
0
gravatar for ajmaninisha
2.3 years ago by
ajmaninisha30
Canada
ajmaninisha30 wrote:

Hi,

 

I am trying to use gff read and it is giving the error:

 

Uncaught exception in API exposed method

 

 

Kindly advise

 

Regards

Nisha

gff software error read • 682 views
ADD COMMENTlink modified 2.3 years ago • written 2.3 years ago by ajmaninisha30

More details will help us to answer best:

Where are you using the tool? URL of server, if public, or cloud or local.

Which exact tool are you using? Common tool panel name if at http://usegalaxy.org, or tool name and URL to external public server, or a link to the Tool Send repo if using a local/cloud.

How was the tool executed? Through the user web interface (direct from the history or in a workflow?) or through your own API script? 

ADD REPLYlink written 2.3 years ago by Jennifer Hillman Jackson24k

i am using it on usegalaxy .org . trying to use it from NGS: RNA SEQ

ADD REPLYlink written 2.3 years ago by ajmaninisha30
0
gravatar for Jennifer Hillman Jackson
2.3 years ago by
United States
Jennifer Hillman Jackson24k wrote:

Hello,

I can replicate the problem. Our team will be working to correct this with priority. Please follow this github ticket for progress: https://github.com/galaxyproject/galaxy/issues/999

Thank you for reporting the problem! Jen, Galaxy team

ADD COMMENTlink written 2.3 years ago by Jennifer Hillman Jackson24k

ok thanks

ADD REPLYlink written 2.3 years ago by ajmaninisha30

Hi Jen,

I think gff read is not working kindly advise. I am using use.galaxy.org.

Kindly advise

Nisha

ADD REPLYlink written 2.3 years ago by ajmaninisha30

Please follow the github ticket for the resolution. We are actively working on correcting the problem with the tool.

ADD REPLYlink written 2.3 years ago by Jennifer Hillman Jackson24k
0
gravatar for ajmaninisha
2.3 years ago by
ajmaninisha30
Canada
ajmaninisha30 wrote:

kindly advise i am still waiting for gffread to work

ADD COMMENTlink written 2.3 years ago by ajmaninisha30

Please follow the github ticket for the resolution. We are actively working on correcting the problem with the tool.

ADD REPLYlink written 2.3 years ago by Jennifer Hillman Jackson24k

Hi, I'm having the same problem but the github link doesn't seem to provide a resolution. Is there an update for this? Thanks. 

ADD REPLYlink written 2.1 years ago by as93090

The ticket will track progress as the development team (both core and community) triage, troubleshoot, and publish the tool fix. I will also make an internal request to have it looked it. Thanks for your patience! Jen, Galaxy team

ADD REPLYlink written 2.1 years ago by Jennifer Hillman Jackson24k
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