Question: Join GEO2R microarray data and ChIP seq data using gene symbol
gravatar for maryjolaws
2.4 years ago by
United States
maryjolaws0 wrote:

Using GEO2R in GEO Omnibus, I have analyzed public available data and exported deferentially regulated genes as a text file. The file has the following columns: affymetrix ID"    "adj.P.Val"    "P.Value"    "Gene.symbol"    "Gene.title"

I would like to join this data with a BED file of ChIP seq data I have using the gene symbol. When I run the 'join' function it comes back with nothing. Just says empty. What am I doing wrong? 


join • 604 views
ADD COMMENTlink written 2.4 years ago by maryjolaws0

Do you have the Quotation mark as part of your data?

ADD REPLYlink written 2.4 years ago by Bjoern Gruening4.9k
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