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• BAM files on IGV look empty
  Thanks for your previous help. I use these demonstration files https://zenodo.org/record/582600#....
• To get "display at UCSC main" after uploading .bw ChIP-seq file
  Dear Sir/Madam, I have just recently directly uploaded a couple of bigwig files for ChIP seq dat...
• IGV integration with Galaxy
  I have a couple questions about the IGV integration with Galaxy: 1. [This site at Princeton][1]...
• about 'IGV view'
  Hi, I wanted to display my bowtie or cuffmerge result in IGV view, the sentence came out: 'The f...
• IGV load error when trying to view vcf file
  Hi,  I'm trying to view a vcf file that was generated on our local galaxy server (tracking maste...
• Displaying bam or bigwig files in UCSD genome browser
  Hello, I am attempting to view my RNAseq mapping file output (SAM) on the UCSC genome browser. T...
• No "local" option to view BAM files with IGV
  Hi I have BAM files loaded onto the main Galaxy server (usegalaxy.org) and I want to visualize t...
• problem with visualizing VCF files in IGV
  Hi every body, I am trying to visualize a VCF file (VCFannotation output from Galaxy) in IGV. I...
• Unable to download bam index file
  I have analysed my RNA seq data using TopHat tool under the NGS- RNA seq analysis heading. After ...
• FeatureCount output does not match view in IGV browser
  I have a BAM file that I view locally in IGV browser. Specifically, I am focused on hsa-mir-122. ...
• Problem Loading Bam Into Igv Browser - Invalid Gzip Header Error Message
  Dear all, sometimes I encouter a problem trying to load BAM files directly from Galaxy into the...
• Display with IGV internal server error/conflict
  I have uploaded bed files and ensured their database and format are correct. When attempting to o...