Question: (Closed) Extracting reads from SNP list
0
gravatar for d.angra
2.8 years ago by
d.angra50
United Kingdom
d.angra50 wrote:

Hi Galaxy experts

I am working on a non-model species and have created a denovo transcriptome assembly from more than 10 datasets, in order to identify SNPs. I have used galaxy to successfully obtain a list of good quality, high confidence SNPs. Now I need to extract the reads from the SNP list. Can any of you please advice me on tools to use in galaxy to help me achieve this?

 

Thanks in advance

 

Viva

snp • 636 views
ADD COMMENTlink written 2.8 years ago by d.angra50

Hello d.angra!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.

Cheers!

PS: Please avoid double posting the same question on the forum.
ADD REPLYlink written 2.8 years ago by Jennifer Hillman Jackson24k
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