Question: Error in Downloading Tool to Local Galaxy
0
gkuffel22 • 170 wrote:
Hi,
I am trying to download some new tools for microRNA expression analysis such as cutadapt and miRDeep2, however these tools have dependencies on Perl 5.18 and no matter what I try I cannot get Perl to install. Here are the errors I am seeing when I try to download Perl:
| Name | Version | Type | Status | Error |
|---|---|---|---|---|
| perl | 5.18.1 | package | Error | File "/data/galaxy2/galaxy-dist/lib/tool_shed/galaxy_install/install_manager.py", line 139, in install_and_build_package_via_fabric tool_dependency = self.install_and_build_package( tool_shed_repository, tool_dependency, actions_dict ) File "/data/galaxy2/galaxy-dist/lib/tool_shed/galaxy_install/install_manager.py", line 124, in install_and_build_package initial_download=False ) File "/data/galaxy2/galaxy-dist/lib/tool_shed/galaxy_install/tool_dependencies/recipe/recipe_manager.py", line 32, in execute_step initial_download=initial_download ) File "/data/galaxy2/galaxy-dist/lib/tool_shed/galaxy_install/tool_dependencies/recipe/step_handler.py", line 776, in execute_step return tool_dependency, None, None File "/usr/lib64/python2.6/contextlib.py", line 34, in __exit__ self.gen.throw(type, value, traceback) File "/usr/lib64/python2.6/contextlib.py", line 113, in nested yield vars File "/data/galaxy2/galaxy-dist/lib/tool_shed/galaxy_install/tool_dependencies/recipe/step_handler.py", line 773, in execute_step return_output=False ) File "/data/galaxy2/galaxy-dist/lib/tool_shed/galaxy_install/tool_dependencies/recipe/install_environment.py", line 130, in handle_command output = self.handle_complex_command( command ) File "/data/galaxy2/galaxy-dist/lib/tool_shed/galaxy_install/tool_dependencies/recipe/install_environment.py", line 200, in handle_complex_command print line [Errno 11] Resource temporarily unavailable |