Question: creating applications for python3.4
gravatar for jasperkoehorst
3.1 years ago by
jasperkoehorst10 wrote:

I am trying to deploy my applications that I currently have in development towards the galaxy tool shed.

They however required python3.4 and biopython for python3.4. How do I tell galaxy that? I found some code within the tool shed but I am not sure if this will then be 2.7 or 3.4...

<?xml version="1.0"?>
    <package name="biopython" version="1.61">
        <repository changeset_revision="ae9dda584395" name="package_biopython_1_61" owner="biopython" toolshed="" />


tool config python3.4 • 793 views
ADD COMMENTlink modified 3.1 years ago by Martin Čech ♦♦ 4.4k • written 3.1 years ago by jasperkoehorst10
gravatar for Martin Čech
3.1 years ago by
Martin Čech ♦♦ 4.4k
United States
Martin Čech ♦♦ 4.4k wrote:


there is package by the IUC for python3.4 - and by Peter Cock for various biopython versions:

If you have more specific questions about biopython I suggest you ask in the repo linked above.

All of these are available at Galaxy Tool Shed. If you make your tool dependent on these packages (through the tool_dependencies.xml) you can count on having them available.

Let us know if you need more help.


ADD COMMENTlink modified 3.1 years ago • written 3.1 years ago by Martin Čech ♦♦ 4.4k
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