Question: Generation of reference using CLC Genomic Workbench
gravatar for pkeneilwe
3.0 years ago by
South Africa
pkeneilwe0 wrote:

Hello everyone,

 I  have to analyse the transcriptome data in order to identify differentially expressed genes in the 3 B.rossi strains. There is no  reference genome as it has never been sequenced before. I am using CLC Genomics Workbench so I would like to generate a reference. How do I do that? Step by step if possible.

I am new to RNA Seq, so your assistance will be greatly appreciated.

Thanking you in advance.


rna-seq • 702 views
ADD COMMENTlink modified 3.0 years ago by Jennifer Hillman Jackson23k • written 3.0 years ago by pkeneilwe0
gravatar for Jennifer Hillman Jackson
3.0 years ago by
United States
Jennifer Hillman Jackson23k wrote:


Here are instructions for adding in a Custom genome:

Thanks, Jen, Galaxy team

ADD COMMENTlink written 3.0 years ago by Jennifer Hillman Jackson23k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 70 users visited in the last hour