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13
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1
answer
4.7k
views
11 follow
1
answer
1
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2
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2.8k
views
2
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Reference Genomes At Local Instance Of Galaxy
galaxy written 5.9 years ago by Yang, Yanming10 • updated 6 months ago by laurent.fournier10
1
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10
answers
2.5k
views
10
answers
Adding a reference genome to local Galaxy
local galaxy reference genome written 2.3 years ago by ekob2010 • updated 12 months ago by qaedi.650
1
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2
answers
2.3k
views
5 follow
2
answers
venv/bin/activate: No such file or directory
local galaxy galaxy venv/bin/activate install written 23 months ago by wippermm10 • updated 6 months ago by n.goue30
5
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4
answers
2.0k
views
8 follow
4
answers
1
vote
2
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1.7k
views
2
answers
4
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3
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1.6k
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3
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fastq to bam
bam written 19 months ago by aaltaytas0 • updated 7 weeks ago by fp2150
2
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11
answers
1.6k
views
11
answers
3
votes
0
answers
1.5k
views
5 follow
0
answers
0
votes
2
answers
1.5k
views
2
answers
Stitch Maf Blocks
galaxy written 4.4 years ago by Jennifer Di Tommaso20 • updated 11 months ago by biofilia0
3
votes
2
answers
1.4k
views
2
answers
gff to gtf conversion
rna-seq gtf tophat gff written 15 months ago by computationalvarun20 • updated 9 months ago by Guy Reeves1.0k
3
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5
answers
1.4k
views
5
answers
2
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1
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1.3k
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1
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Forum: The Biostar Handbook is out. Perhaps the Galaxy Handbook should be next?
galaxy handbook forum written 14 months ago by Istvan Albert260 • updated 7 months ago by anavisharma345770
3
votes
2
answers
1.2k
views
2
answers
Local Tophat Error "OSError: [Errno 2] No such file or directory"
samtools local admin tophat path written 16 months ago by deane30 • updated 5 weeks ago by yusheng_tan0
2
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5
answers
1.2k
views
5
answers
1
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2
answers
1.2k
views
2
answers
9
votes
6
answers
1.2k
views
7 follow
6
answers
TopHat tool missing?
usegalaxy.org hisat tophat rna-seq written 8 months ago by johanvn10 • updated 8 months ago by franklin_moreno0
3
votes
7
answers
1.1k
views
5 follow
7
answers
DiffBind on Galaxy
en_us.utf-8 error written 2.0 years ago by j.m.fustin10 • updated 11 months ago by zachary.gaber80
3
votes
6
answers
1.0k
views
5 follow
6
answers
How to create GFF file for HT seq
bam rna-seq written 18 months ago by shraddha.adamane10 • updated 7 weeks ago by Joey Zou0
1
vote
1
answer
1.0k
views
1
answer
Tophat vs HISAT
cufflinks tophat rna-seq written 9 months ago by Beatriz Ramos10 • updated 9 months ago by Jennifer Hillman Jackson24k
4
votes
2
answers
1.0k
views
2
answers
Fail to upload data to local Galaxy 16.07
set_metadata python lib not found upload written 14 months ago by david.a.morais110 • updated 11 months ago by heidi.hough0
0
votes
2
answers
997
views
2
answers
Microrna Seq Data Workflow Analysis
galaxy written 7.6 years ago by Ana Sevilla20 • updated 8 months ago by valasek0
1
vote
2
answers
958
views
2
answers
Failure to download data from EBI-SRA to a local Galaxy instance
ebi sra download written 2.8 years ago by yu.1.wang20 • updated 3 months ago by mohancm890
2
votes
2
answers
922
views
2
answers
0
votes
2
answers
916
views
2
answers
How to use cuffmerge and cuffdiff
rna-seq written 10 months ago by lrm_19850 • updated 4 months ago by h.jagatia0
2
votes
1
answer
908
views
1
answer
"Unable to finish job" but no errors, data seems to be there?
tophat written 2.4 years ago by Brian Griffiths20 • updated 5 weeks ago by yusheng_tan0
19
votes
9
answers
904
views
13 follow
9
answers
Workflow cannot run - Admin: older issue, see 25048 for current
workflow written 13 months ago by wuw11180 • updated 4 months ago by Jennifer Hillman Jackson24k
2
votes
2
answers
899
views
2
answers
TopHat - set metadata manually or retry auto-detection
tophat rna-seq written 19 months ago by avoltz30 • updated 3 months ago by Wanderer10
0
votes
2
answers
870
views
2
answers
4
votes
2
answers
856
views
2
answers
salmon gene quant to DESeq2
galaxy rna-seq written 7 months ago by matthew.johnson20 • updated 6 months ago by devbt1530
1
vote
2
answers
841
views
2
answers
Problem With Downloading
galaxy written 4.6 years ago by GANDRILLON OLIVIER70 • updated 8 months ago by sameerdilipkhot20
3
votes
2
answers
835
views
6 follow
2
answers
Phenotype data for Ballgown tool
ballgown galaxy rna-seq written 9 months ago by tamrin.chowdhury40 • updated 7 weeks ago by rpink10
2
votes
2
answers
812
views
2
answers
how to Installing Tools into Galaxy from Tool Shed
galaxy written 2.6 years ago by kaimiao0 • updated 11 months ago by bijaya.malla0
2
votes
2
answers
809
views
2
answers
type of file for reference genome
tophat written 3.8 years ago by namratakumari10 • updated 9 months ago by westcott10
5
votes
3
answers
795
views
3
answers
Forum: An entertaining read about BWA, Picard, GATK
galaxy software error forum bwa bam samtools written 12 months ago by apozhitkov50 • updated 8 months ago by linying91140
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