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60
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11
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1
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15
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using snpEff via galaxy
galaxy snp written 1 day ago by mr.donmez.emre0 • updated 23 hours ago by Martin Čech ♦♦ 3.8k
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11
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p-value threshold varscan
galaxy written 1 day ago by minma0
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9
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VCF file samples not called
snp written 1 day ago by minma0
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16
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0
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htseq-count did not work
rna-seq written 2 days ago by nataliamurielt0
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14
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0
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0
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13
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how to access data on galaxy from variantdb
access galaxy data written 2 days ago by muz8800 • updated 2 days ago by Martin Čech ♦♦ 3.8k
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12
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0
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1
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19
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1
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Problem using data in different tools in galaxy
rna-seq written 3 days ago by j_deyarmin0 • updated 2 days ago by luca.marisaldi30
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2
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31
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2
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0
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1
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35
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1
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Galaxy -- use of MinION data to convert FastQ to FastA
galaxy written 7 days ago by mdfinton0 • updated 3 days ago by rmill1170
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23
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remove in mapping results the reads that aligned > 1 times
galaxy bowtie alignment written 3 days ago by cpozacarrion0 • updated 3 days ago by Devon Ryan1.3k
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13
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0
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1
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38
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1
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Trinity run failed at start- please help
de novo assembly trinity rna-seq written 3 days ago by gg83210 • updated 3 days ago by Nate Coraor3.0k
2
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2
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65
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2
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TRINITY taking forever
rna-seq galaxy assembly written 5 days ago by bcking210 • updated 3 days ago by luca.marisaldi30
1
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23
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1
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clear overrepresented reads that arent adaptadors
rna-seq written 5 days ago by biopili910 • updated 3 days ago by luca.marisaldi30
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17
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0
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0
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0
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16
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284
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5 follow
1
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15
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0
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0
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2
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70
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2
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Queue times to run Trinity?
rna-seq galaxy trinity written 9 days ago by gg83210
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1
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21
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1
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How to use cuffmerge and cuffdiff
rna-seq written 4 days ago by lrm_19850 • updated 4 days ago by Jennifer Hillman Jackson22k
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12
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0
answers
0
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0
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19
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0
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1
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1
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45
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1
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Problem with Trinity
rna-seq trinity written 9 days ago by claudia.mosquera10 • updated 4 days ago by Jennifer Hillman Jackson22k
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0
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23
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0
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2
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4
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1.2k
views
6 follow
4
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VCFfilter: combining 2 expressions using OR or AND.
vcf written 21 months ago by mohamed_refaat.199210 • updated 4 days ago by leminhtan2420000
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2
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62
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2
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rna seq read cleaning
alignment rna-seq written 16 days ago by rahul.sg980 • updated 4 days ago by luca.marisaldi30
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21
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0
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0
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1
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45
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1
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Using Cufflinks v. 2.2.1.5
cuffdiff cufflinks cuffmerge rna-seq written 18 days ago by gkuffel22170 • updated 4 days ago by Martin Čech ♦♦ 3.8k
2
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1
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88
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1
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2
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2
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65
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6 follow
2
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Jobs as gray history
rna-seq written 5 days ago by bioraihan20
2
votes
1
answer
46
views
1
answer
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