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20
votes
10
answers
1.3k
views
14 follow
10
answers
Workflow cannot run - Admin: older issue, see 25048 for current
workflow written 19 months ago by wuw11180 • updated 5 months ago by a.januszewski10
13
votes
1
answer
5.8k
views
11 follow
1
answer
7
votes
2
answers
1.3k
views
9 follow
2
answers
Galaxy failed to unzip gz files after uploading
chip-seq gz galaxy unzip written 19 months ago by jamwest10120 • updated 7 weeks ago by maisarahabsamad0
12
votes
2
answers
282
views
8 follow
2
answers
15
votes
6
answers
1.8k
views
8 follow
6
answers
How can I get the version of a running instance of galaxy ?
version written 4.3 years ago by plindenbaum90 • updated 13 days ago by arunaravind2110
6
votes
3
answers
1.2k
views
7 follow
3
answers
GATK (deprecated tools)
gatk galaxy written 17 months ago by apozhitkov60 • updated 3 months ago by gintotomticket0
9
votes
2
answers
248
views
7 follow
2
answers
8
votes
1
answer
348
views
7 follow
1
answer
4
votes
2
answers
289
views
6 follow
2
answers
3
votes
3
answers
316
views
6 follow
3
answers
biopython not installed?
ribotools biopython written 6 months ago by valdirbarth60 • updated 3 months ago by taxicar00290
2
votes
2
answers
759
views
6 follow
2
answers
3
votes
2
answers
1.8k
views
6 follow
2
answers
Phenotype data for Ballgown tool
ballgown galaxy rna-seq written 15 months ago by tamrin.chowdhury40 • updated 7 months ago by rpink10
2
votes
3
answers
310
views
6 follow
3
answers
AWS incorrect credentials
credentials invalid credentials aws cloudman written 6 months ago by av.kuklin20 • updated 3 months ago by c2c1210
4
votes
2
answers
198
views
6 follow
2
answers
Cannot add an admin account after modifying galaxy.yml
ini galaxy yml admin installation written 11 weeks ago by peerah10 • updated 10 weeks ago by Wolfgang Maier550
1
vote
1
answer
1.2k
views
6 follow
1
answer
Naming output file according to input file
galaxy tool dev written 2.5 years ago by Rob50 • updated 3 months ago by Thon deBoer20
5
votes
8
answers
1.6k
views
6 follow
8
answers
DiffBind on Galaxy
en_us.utf-8 error written 2.5 years ago by j.m.fustin10 • updated 5 months ago by Jennifer Hillman Jackson25k
4
votes
3
answers
175
views
5 follow
3
answers
Using Featurecounts with a custom genome/build
rna-seq custom genome featurecounts build written 3 months ago by mserafeddinsolak10 • updated 3 months ago by tiamaamihyia0
4
votes
2
answers
1.3k
views
5 follow
2
answers
pileup to vcf
galaxy mpileup vcf pileup written 3.6 years ago by charles.wray20 • updated 11 weeks ago by Jennifer Hillman Jackson25k
4
votes
1
answer
225
views
5 follow
1
answer
BWA error [bwa_aln] 17bp reads: max_diff = 2
software error bwa alignment written 7 months ago by eurioste40 • updated 7 months ago by Jennifer Hillman Jackson25k
3
votes
0
answers
1.9k
views
5 follow
0
answers
5
votes
3
answers
443
views
5 follow
3
answers
1
vote
1
answer
413
views
5 follow
1
answer
Upload to Galaxy 500 error
browser galaxy ftp upload written 8 months ago by ruddmeg0 • updated 8 months ago by Jennifer Hillman Jackson25k
2
votes
2
answers
534
views
5 follow
2
answers
1
vote
1
answer
672
views
5 follow
1
answer
htseq-count failed with error no exon found
htseq htseq-count written 18 months ago by sapna01t30 • updated 11 months ago by aadishail0
1
vote
2
answers
4.2k
views
5 follow
2
answers
venv/bin/activate: No such file or directory
local galaxy galaxy venv/bin/activate install written 2.4 years ago by wippermm10 • updated 11 months ago by n.goue50
4
votes
2
answers
256
views
5 follow
2
answers
Privacy of data
choices galaxy data security privacy written 5 months ago by elihuixu20 • updated 5 months ago by Bjoern Gruening5.1k
2
votes
1
answer
386
views
5 follow
1
answer
Proper ways to stop and restart Cloudman/AWS/Galaxy instance
cloudman written 8 months ago by clarsen10 • updated 8 months ago by Enis Afgan690
5
votes
1
answer
1.0k
views
5 follow
1
answer
FTP Connection Refused
galaxy ftp written 11 months ago by renae.geier40 • updated 11 months ago by Nate Coraor3.2k
3
votes
1
answer
464
views
5 follow
1
answer
Galaxy instance on jestream- cluster error for downloaded files
galaxy jetstream admin written 12 months ago by nfillmor10 • updated 11 months ago by Enis Afgan690
4
votes
1
answer
142
views
5 follow
1
answer
No space left on device error
galaxy written 6 weeks ago by saraann.maxwell20 • updated 5 weeks ago by Martin Čech ♦♦ 4.8k
3
votes
6
answers
1.5k
views
5 follow
6
answers
How to create GFF file for HT seq
bam rna-seq written 2.0 years ago by shraddha.adamane10 • updated 7 months ago by Joey Zou0
5
votes
2
answers
195
views
2
answers
1
vote
0
answers
125
views
0
answers
How to solve DESeq2 error
open deseq2 rna-seq written 5 weeks ago by wangl1610 • updated 5 weeks ago by Jennifer Hillman Jackson25k
2
votes
0
answers
256
views
0
answers
News: usegalaxy.org maintenance on Sept 19
news usegalaxy.org main written 11 months ago by Dave Clements ♦♦ 2.4k • updated 11 months ago by Jennifer Hillman Jackson25k
3
votes
0
answers
146
views
0
answers
Problem with the tool: Extract Genomic DNA
chip-seq galaxy extract written 7 weeks ago by mariane.cfugulin20 • updated 18 days ago by Jennifer Hillman Jackson25k
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